Fine-tuning innovation to meet COVID challenges
- By Susan Miller
- Mar 29, 2020
The [email protected] distributed computing project has reached exascale processing power with the quickly growing number of citizen scientists running simulations of protein dynamics on their PCs to find protein structures that drugs could target to fight and treat COVID-19.
Computationally expensive molecular science is usually conducted on supercomputers, but the program’s expanding user base has generated an exaflop of computing power, or a billion billion calculations per second, making it 10 times faster than Summit, the world’s fastest publicly ranked 200- supercomputer at Oak Ridge National Lab.
Summit has been running molecular dynamics simulations on the virus’ main “spike” protein, hoping to found a compound that would bind to the spike, interfering with the infection process. Scientists at Oak Ridge were able to identify 77 candidate compounds (such as medications) that warranted further experimentation, helping to narrow the field for medical researchers.
However, researchers needed more analysis of structure and behavior of COVID-19’s viral proteins, so [email protected]’s Director Greg Bowman committed the program to developing an antibody that could help to prevent the virus from infecting lung cells, like the one developed for SARS-CoV.
A rush of volunteers even caused some downtime as the [email protected] team rushed to set up more simulations for volunteers to run.
VMware developed an appliance for [email protected] that runs in vSphere environments along with a vRealize operations dashboard to query the [email protected] APIs and report statistics.
Researchers at the University of Massachusetts Amherst have invented a portable surveillance device that listens for coughing and sneezing and analyzes the audio data to detect flu-like illnesses and influenza trends.
Powered by machine learning, the FluSense edge-computing platform was envisioned to be used in in hospitals, health care waiting rooms and larger public spaces.
It uses a Raspberry Pi and neural computing engine for analyzing data from a low-cost microphone array and a thermal camera, storing no personally identifiable information, such as speech data or distinguishing images.
The researchers first developed a lab-based cough model and trained the deep neural network classifier to draw boxes on thermal images representing people and then to count the coughing individuals. They tested the dictionary-sized FluSense devices in four waiting rooms at the university’s health clinic from December 2018 to July 2019.
In that time, the FluSense platform collected and analyzed more than 350,000 thermal images and 21 million non-speech audio samples from the public waiting areas.
The researchers found that FluSense was able to accurately predict daily illness rates at the university clinic. Multiple and complementary sets of FluSense signals “strongly correlated” with laboratory-based testing for flu-like illnesses and influenza itself.
According to the study, “the early symptom-related information captured by FluSense could provide valuable additional and complementary information to current influenza prediction efforts,” such as the FluSight Network, which is a multidisciplinary consortium of flu forecasting teams.
In the private sector, Austin-based Athena Security is developing an COVID19 screening component as part of its AI-enabled gun detection security camera platform that it says will be able to detect fevers in people and alert camera owners that people may be carrying the coronavirus.
"Since higher temperature is one of the first symptoms, these cameras can be life-saving— warning the person that they could have the virus and encouraging that person to take serious steps to self-quarantine," the company told Motherboard.
An early version of the recently-passed coronavirus relief package included a plan for a government-run digital payment platform to disperse federal funds.
The early draft of the House Democrats’ proposed stimulus package called on the Federal Reserve to make ‘digital dollar wallets’ available to U.S. citizens, legal permanent residents and businesses, where stimulus funds could be deposited directly from the Federal Reserve, according to a report in MIT Technology Review.
Too big a lift on too short notice to make it into the final bill, the idea behind FedAccounts is that citizens and business could have accounts with the Federal Reserve where digital currency – much like what the Fed already uses with banks – could be deposited. The accounts would offer “high interest, instant payments, and full government backing [and] … all the functionality of ordinary bank accounts with the exception of overdraft coverage,” according to a 2018 paper on the concept.
“The FedAccount program would put government-issued digital or ‘account’ money on par with government-issued physical currency, transforming digital dollars into a resource that anyone can use,“ the authors wrote. The system would seamlessly interoperate with the existing and reliable technology the Fed currently uses for money and payments.
The Senate also floated a version of the idea. The Banking for All Act, introduced March 24 by Sen. Sherrod Brown, (D-Ohio), would require banks to maintain "digital dollar wallets," which would let the millions of unbanked consumers access coronavirus stimulus payments by setting up FedAccounts at local banks and post offices. Account holders would receive debit cards, online account access, automatic bill pay, mobile banking and ATM access at post offices, Brown said in his announcement.
Drones on patrol
The Australian Vital Intelligence Project, a health and respiratory observation platform, is using drones for health monitoring and detection of infectious conditions including checking temperatures along with heart and respiratory rates in crowds, among workers, on airlines and cruise ships, and for potential at-risk groups, such as seniors in care facilities, border crossings or critical infrastructure sites.
The technology, developed by the country’s Department of Defence Science and Technology Group and the University of South Australia, will be integrated and deployed by Draganfly, a North American drone services company.
The Draganfly drones will carry a range of sensors and high-definition cameras networked with intelligence software that will be able to detect infectious and respiratory conditions -- including coughing -- and monitor people’s and heart and respiration rates and temperatures at ranges up to 100 feet away. Rather than identifying individuals who are ill, the technology is designed to assess the pervasiveness of likely infection within a given population, according to a report in AINonline.
In China, police-operated drones kept eye on pedestrians that venture outdoors. Equipped with cameras and loudspeakers, the drones allowed authorities to admonish people who neglected to wear a mask, congregated in groups or were eating in public places (and removing their masks) rather than waiting until they get home. Camera-carrying drones have also been used to monitor how hospitals dispose of medical waste and UAVs designed to spray pesticides on farmland have been retooled to spray disinfectant in public spaces.
The Chula Vista, Calif., Police Department plans to use its DJI drones carrying loudspeakers – and possibly night-vision cameras -- to help get to word out to remote and homeless communities about the coronavirus and enforce lockdown orders.
“With fighting epidemics rising as a global priority, new versatile technologies, such as humanitarian mission UAVs, are immediately needed to detect and track outbreaks so that critical interventions can be deployed sooner and with greater effectiveness,” said Dr. Jack Chow, former first assistant director-general of the World Health Organization on infectious diseases.